We, Russian scientists of the
team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Compare two motifs
Find similar motif
rSNP TFBS annotation
Dinucleotide motif discovery
HOCOMOCO – collection of TFBS motifs
EpiFactors – database for epigenetic regulators
ADASTRA – database of allele-specific TF binding sites
Paste a list of sequences with SNPs in a textarea or select a file with sequences to scan
SNPs with flanking sequences (at least 25 nucleotides from each side):
rs10040172 gatttgccctgattgcagttactga[G/A]tggtacagacatcgtaataatctta rs10116271 taaattctatgtggggaagaggtct[C/T]gtagaggcgatgattcttacattgc rs10208293 cttcatacatttatgtccagtacct[A/G]tggaccctccttgtgaactcttctc rs10431961 tggcggggctggtcaggcggcgtcg[C/T]cggtacgctctgagcggcagcgtgt
or load a file with SNP-sequences:
TFBS motif collection:
Fold change cutoff:
Find TFBS motifs binding alleles of a single-nucleotide variant with different affinity.
Click a field in the form on the left to get a hint
Supported by RFBR grants 15-34-20423 and 16-34-01318.