We, Russian scientists of the
team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Compare two motifs
Find similar motif
rSNP TFBS annotation
Dinucleotide motif discovery
HOCOMOCO – collection of TFBS motifs
EpiFactors – database for epigenetic regulators
ADASTRA – database of allele-specific TF binding sites
Toy examples for the
Single strand (RNA)
Paste a list of sequences in a textarea or select a file with sequences to scan
Sequence set in extended multi-fasta format:
> 10.0 GTGACGGTAGTCGATTACCCCGTGACTGTGAGC > 5.0 CCCCCCCTTACCCCAGTGATAA > 10.0 AAAAAAAAAAAAAAAAAAAAAAAAAA > 2.0 CCCCCCCCCCCCCCCCCCCCCCCC
or load a file with sequences:
Minimal motif length:
Maximal motif length:
Occurences per sequence:
Motif shape prior:
Background GC percent:
De novo motif discovery in nucleotide sequences.
Click a field in the form on the left to get a hint
Supported by RFBR grants 15-34-20423 and 16-34-01318.